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2023
1 Ahmed, Husnain; Khan, Essa Ahsan; Tietze, Lisa; Fages-Lartaud, Maxime; Totlani, Kartik; Bjørkøy, Astrid; Rückert, Christian; Busche, Tobias; Kalinowski, Jörn; Shingler, Vicky; Stokke, Bjørn Torger; Lale, Rahmi.
Identification of novel sigma 54 DNA binding sequences using artificial promoters in Pseudomonas putida. Norwegian Biochemical Society (NBS) contact meeting 2023; 2023-01-19 - 2023-01-22
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2 Dahiya, Gurvinder; Baken, Thea Isabel; Fages-Lartaud, Maxime René; Lale, Rahmi.
From Context to Code: Rational De Novo DNA Design and Predicting Cross-Species DNA Functionality Using Deep Learning Transformer Models. bioRxiv 2023
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3 Dannert, Corinna; Mardal, Ingrid; Lale, Rahmi; Stokke, Bjørn Torger; Dias, Rita.
DNA Condensation by Peptide-Conjugated PAMAM Dendrimers. Influence of Peptide Charge. ACS Omega 2023 ;Volum 8.(47) s. 44624-44636
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4 Lale, Rahmi.
An interdisciplinary study of bacterial transcriptional regulation by combining microfluidics, computational and synthetic biology.. 58th NBS Contact Meeting; 2023-01-19 - 2023-01-22
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5 Lale, Rahmi.
Leveraging AI for context-aware and predictable DNA design in Synthetic Biology. German Association of Synthetic Biology Conference, 7th.; 2023-09-18 - 2023-09-20
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6 Teigset, Erlend Gløer Stedje; Lale, Rahmi.
Microfluidics and synthetic biology methods for enzyme discovery. BIOPROSP_23; 2023-03-14 - 2023-03-16
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7 Totlani, Kartik; Ahmed, Husnain; Ahsan Khan, Essa; Bjørkøy, Astrid; Stokke, Bjørn Torger; Lale, Rahmi.
Droplet-based microfluidics for studying transcriptional regulation in bacteria. SMILS 2023; 2023-05-30 - 2023-05-31
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8 Øvreeide, Ingrid Haga; Szydlak, Renata; Zemla, Joanna; Luty, Marcin; Monaldi, Jessica; Hines, Thomas G.; Zielinski, Tomasz; Prot, Victorien Emile; Lekka, Małgorzata; Winter-Hjelm, Nicolai; Klausen, Kasper; Vinje, Jakob; Sandvig, Ioanna; Sandvig, Axel; Sikorski, Pawel; Ahmed, Husnain; Khan, Essa Ahsan; Totlani, Kartik; Bjørkøy, Astrid; Lale, Rahmi; Stokke, Bjørn Torger.
Micro- and nanofabrication for biophysics and biomedical research. Sensor Day; 2023-04-26 - 2023-04-26
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2022
9 Ahmed, Husnain; Ahsan Khan, Essa; Tietze, Lisa; Fages-Lartaud, Maxime René; Totlani, Kartik; Bjørkøy, Astrid; Stokke, Bjørn Torger; Lale, Rahmi.
Matchmaking inside microdroplets: unravelling the sigma factor specific promoter binding in bacterial in-vitro transcription using droplet microfluidics. EMBL Microfluidics 2022; 2022-07-11 - 2022-07-13
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10 Ahmed, Husnain; Ahsan Khan, Essa; Tietze, Lisa; Fages-Lartaud, Maxime René; Totlani, Kartik; Bjørkøy, Astrid; Stokke, Bjørn Torger; Lale, Rahmi.
Unravelling the sigma factor specific promoter binding in bacterial in-vitro transcription using droplet microfluidics. TNNN Conference 2022; 2022-11-30 - 2022-12-02
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11 Fages-Lartaud, Maxime René; Tietze, Lisa; Elie, Florence; Lale, Rahmi; Hohmann-Marriott, Martin Frank.
mCherry contains a fluorescent protein isoform that interferes with its reporter function. Frontiers in Bioengineering and Biotechnology 2022 ;Volum 10. s. -
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12 Lale, Rahmi.
HSBC Build with Bio – Expert Panel: Can we really „Grow” Everything? Goals and Limits of Synthetic Biology. Online [Internett] 2022-03-09
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13 Lale, Rahmi.
Lessons learned from commercializing a research driven innovation project. NORA.startup event #30: Founding an AI startup as an AI Researcher; 2022-04-21
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14 Lale, Rahmi.
Taking the leap from an AI researcher to an AI founder. NORA.startup event #30: Founding an AI startup as an AI Researcher; 2022-04-21
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15 Lale, Rahmi; Tietze, Lisa; Fages-Lartaud, Maxime René; Nesje, Jenny; Onsager, Ingerid; Engelhardt, Kerstin; Wong, Che Fai Alex; Akan, Madina; Hummel, Niklas; Kalinowski, Jörn; Rückert, Christian; Hohmann-Marriott, Martin Frank.
A universal approach to gene expression engineering. Synthetic Biology 2022 ;Volum 7.(1) s. -
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16 Tietze, Lisa; Hoff, Maria Wilhelmsen; Lale, Rahmi.
Using artificial regulatory sequences to express proteins with Vibrio natriegens. NBS Contact meeting; 2022-02-10 - 2022-02-13
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17 Tietze, Lisa; Mangold, Antonia; Hoff, Maria Wilhelmsen; Lale, Rahmi.
Identification and Cross-Characterisation of Artificial Promoters and 5′ Untranslated Regions in Vibrio natriegens. Frontiers in Bioengineering and Biotechnology 2022 ;Volum 10. s. -
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2021
18 Lale, Rahmi.
AI and Syngens. NORA.startup and NORA.EU (EU Network to Horizon Europe on AI) Event; 2021-10-21 - 2021-10-21
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19 Lale, Rahmi.
Anvendelse av felles europeisk infrastruktur for tungregning. NOKIOS 2021, Plenum 2. NOKIOS – Norsk konferanse for IKT i offentlig sektor; 2021-10-27 - 2021-10-27
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20 Lale, Rahmi.
Gene expression optimisation. Invited lecture; 2021-02-19
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21 Lale, Rahmi; Foundation, iGEM.
POV: An iGEM Judge. YouTube [Internett] 2021-05-16
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22 Oakes, kelly; Lale, Rahmi.
A new way to get cells to spill their secrets. Norwegian SciTech News 2021
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23 Tietze, Lisa; Lale, Rahmi.
Importance of the 5′ regulatory region to bacterial synthetic biology applications. Microbial Biotechnology 2021 s. 1-25
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24 Wong, Che Fai Alex; van Vliet, Liisa; Bhujbal, Swapnil Vilas; Guo, Chengzhi; Sletmoen, Marit; Stokke, Bjørn Torger; Hollfelder, Florian; Lale, Rahmi.
A Titratable Cell Lysis-on-Demand System for Droplet-Compartmentalised Ultrahigh-Throughput Screening in Functional Metagenomics and Directed Evolution. ACS Synthetic Biology 2021 ;Volum 10.(8) s. 1882-1894
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2020
25 Bhujbal, Swapnil Vilas; Dekov, Maren; Ottesen, Vegar; Dunker, Karen; Lale, Rahmi; Sletmoen, Marit.
Effect of design geometry, exposure energy, cytophilic molecules, cell type and load in fabrication of single-cell arrays using micro-contact printing. Scientific Reports 2020 ;Volum 10. s. -
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26 Lale, Rahmi.
A titratable cell lysis system for intracellular products release from Escherichia coli in microfluidic droplets. Plenary lecture. 9th International Molecular Biology and Biotechnology Congress; 2020-12-06 - 2020-12-10
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27 Le, Simone Balzer; Onsager, Ingerid; Lorentzen, Jon Andreas; Lale, Rahmi.
Dual UTR-A novel 5′ untranslated region design for synthetic biology applications. Synthetic Biology 2020 ;Volum 5.(1)
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2019
28 Halsne, Ruth; Lale, Rahmi.
Bakterier med syntetisk genom. Tidsskrift for Den norske legeforening 2019
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29 Hohmann-Marriott, Martin Frank; Vogel, Anne Ilse Maria; Årstøl, Erland; Lale, Rahmi.
Identification of the siderophore biosynthesis operon of Synechococcus sp. PCC 7002. 13thWorkshop on Cyanobacteria; 2019-06-06 - 2019-06-09
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30 Lale, Rahmi.
A novel platform for generating artificial gene expression systems in bacteria and yeast. EMBO Workshop – Creating is Understanding: Synthetic Biology Masters Complexity; 2019-09-22 - 2019-09-25
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31 Lale, Rahmi.
Towards rational design of promoters. Invited Presentation. Seminar; 2019-12-19 - 2019-12-19
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32 Lale, Rahmi; Tietze, Lisa; Nesje, Jenny; Onsager, Ingerid; Engelhardt, Kerstin; Wong, Che Fai Alex; Akan, Madina; Hummel, Niklas; Kalinowski, Jörn; Ruckert, Christian; Hohmann-Marriott, Martin Frank.
A universal method for gene expression engineering. bioRxiv 2019
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33 Lale, Rahmi; Wentzel, Alexander.
Functional Metagenomics 2019 http://www.fmg2019.net/.
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34 Årstøl, Erland; Vogel, Anne Ilse Maria; Lale, Rahmi; Hohmann-Marriott, Martin Frank.
Molecular insights into the siderophore biosynthesis of Synechococcus PCC 7002. 14th Nordic photosynthesis Congress; 2019-05-24 - 2019-05-27
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2018
35 Bhujbal, Swapnil Vilas; Wong, Che Fai Alex; Sletmoen, Marit; Stokke, Bjørn Torger; Lale, Rahmi.
MetaFluidics: A platform for rapid and cost-effective functional metagenomic screening. Digital Life 2018; 2018-03-20 - 2018-03-21
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36 Lale, Rahmi.
Expanding the Synthetic Biology Toolbox. Invited presentation, DTU Biosustainability; 2018-05-14
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37 Lale, Rahmi.
Expanding the Synthetic Biology Toolbox: An overview of the tools designed at PhotoSynLab. Invited Presentation. Synthetic Biology Conference in Bremen; 2018-10-11 - 2018-10-12
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38 Lale, Rahmi.
Kavliprisen i nanovitenskap. Fra Fysikkens Verden 2018 (3) s. 61-62
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39 Schneider, Olha; Simic, Nebojsa; Aachmann, Finn Lillelund; Rückert, Christian; Kristiansen, Kåre Andre; Kalinowski, Jörn; Jiang, Yi; Wang, Lisong; Jiang, Cheng-Lin; Lale, Rahmi; Zotchev, Sergey B.
Genome Mining of Streptomyces sp. YIM 130001 Isolated From Lichen Affords New Thiopeptide Antibiotic. Frontiers in Microbiology 2018 ;Volum 9.(3139) s. -
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40 Tietze, Lisa; Lale, Rahmi.
The Development of a Universal Synthetic Promoter-5´ UTR Design Platform. Digital Life Norway annual conference; 2018-03-20 - 2018-03-21
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41 Vogel, Anne Ilse Maria; Winther-Larsen, Hanne Cecilie; Roos, Norbert; Lale, Rahmi; Hohmann-Marriott, Martin Frank.
A novel function of type IV pili in iron uptake in Synechococcus sp. PCC 7002. ISPR conference on microbial photosynthesis; 2018-08-09 - 2018-08-12
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42 Vogel, Anne Ilse Maria; Winther-Larsen, Hanne Cecilie; Roos, Norbert; Lale, Rahmi; Hohmann-Marriott, Martin Frank.
Conductive Type IV pili play an important role for iron acquisition in the marine cyanobacterium Synechococcus sp. PCC 7002. 16th International Symposium on Phototrophic Prokaryotes; 2018-08-05 - 2018-08-09
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43 Vogel, Anne Ilse Maria; Winther-Larsen, Hanne Cecilie; Roos, Norbert; Lale, Rahmi; Hohmann-Marriott, Martin Frank.
Function of type IV pili in iron acquisition in Synechococcus sp. PCC 7002. ePS-Young meeting; 2018-06-24
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44 Vogel, Anne Ilse Maria; Winther-Larsen, Hanne Cecilie; Roos, Norbert; Lale, Rahmi; Hohmann-Marriott, Martin Frank.
Function of type IV pili in iron acquisition in Synechococcus sp. PCC 7002. ePS-1; 2018-06-25 - 2018-06-28
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45 Vogel, Anne Ilse Maria; Winther-Larsen, Hanne Cecilie; Roos, Norbert; Lale, Rahmi; Hohmann-Marriott, Martin Frank.
Function of type IV pili in iron acquisition in Synechococcus sp. PCC 7002. ePS-Young meeting; 2018-06-24 - 2018-06-25
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2017
46 Lale, Rahmi.
Communicating Science in the Digital Life Age. Digital Life Conference; 2017-03-20 - 2017-03-21
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47 Lale, Rahmi; Valla, Svein; Balzer, Simone; Onsager, Ingerid; Lorentzen, Jon Andreas.
DualUTR – A novel 5' UTR design for synthetic biology applications. Synthetic Biology UK 2017; 2017-11-27 - 2017-11-28
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48 Ramisetty, Sravani Keerthi; Langlete, Petter; Lale, Rahmi; Dias, Rita de Sousa.
In vitro studies of DNA condensation by bridging protein in a crowding environment. International Journal of Biological Macromolecules 2017 ;Volum 103. s. 845-853
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49 Vogel, Anne Ilse Maria; Lale, Rahmi; Hohmann-Marriott, Martin Frank.
Streamlining recombination-mediated genetic engineering by validating three neutral integration sites in Synechococcus sp. PCC 7002. Journal of Biological Engineering 2017 ;Volum 11.(19) s. -
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50 Vogel, Anne Ilse Maria; Lamb, Jacob Joseph; Lale, Rahmi; Hohmann-Marriott, Martin Frank.
Streamlining recombination-mediated genetic engineering in Synechococcus sp. PCC 7002 by validating three neutral integration sites. SB 7.0; 2017-06-13 - 2017-06-16
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